Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tnfrsf9P20334 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Gm5864-201ENSMUST00000202263 970 ntBASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Tnfrsf9P20334 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.42□□□□□ -0.26
Tnfrsf9P20334 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gm27357-201ENSMUST00000183754 135 ntBASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gm34391-201ENSMUST00000203706 907 ntBASIC13.42□□□□□ -0.26
Tnfrsf9P20334 AW822252-206ENSMUST00000208904 237 ntBASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tnfrsf9P20334 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Mir770-201ENSMUST00000103252 94 ntBASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Gm13401-201ENSMUST00000117074 291 ntBASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Gm26039-201ENSMUST00000158152 144 ntBASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Gm28659-201ENSMUST00000188013 759 ntBASIC13.41□□□□□ -0.26
Tnfrsf9P20334 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.41□□□□□ -0.26
Tnfrsf9P20334 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tnfrsf9P20334 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tnfrsf9P20334 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms