Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
VimP20152 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.87■□□□□ 0.29
VimP20152 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VimP20152 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VimP20152 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
VimP20152 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
VimP20152 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.86■□□□□ 0.29
VimP20152 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.86■□□□□ 0.29
VimP20152 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.86■□□□□ 0.29
VimP20152 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VimP20152 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.86■□□□□ 0.29
VimP20152 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.86■□□□□ 0.29
VimP20152 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VimP20152 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VimP20152 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
VimP20152 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VimP20152 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VimP20152 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VimP20152 Mir2861-201ENSMUST00000175539 82 ntBASIC16.85■□□□□ 0.29
VimP20152 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.85■□□□□ 0.29
VimP20152 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VimP20152 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
VimP20152 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VimP20152 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.84■□□□□ 0.29
VimP20152 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VimP20152 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.84■□□□□ 0.29
VimP20152 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VimP20152 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VimP20152 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VimP20152 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VimP20152 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
VimP20152 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VimP20152 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VimP20152 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VimP20152 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VimP20152 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.83■□□□□ 0.28
VimP20152 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VimP20152 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VimP20152 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.83■□□□□ 0.28
VimP20152 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.83■□□□□ 0.28
VimP20152 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VimP20152 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VimP20152 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VimP20152 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
VimP20152 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VimP20152 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
VimP20152 Gm13241-201ENSMUST00000094493 780 ntBASIC16.83■□□□□ 0.28
VimP20152 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
VimP20152 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
VimP20152 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VimP20152 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms