Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.13■□□□□ 0.01
Hmgn1P18608 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.13■□□□□ 0.01
Hmgn1P18608 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.13■□□□□ 0.01
Hmgn1P18608 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hmgn1P18608 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hmgn1P18608 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgn1P18608 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgn1P18608 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.12■□□□□ 0.01
Hmgn1P18608 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Hmgn1P18608 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hmgn1P18608 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgn1P18608 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Hmgn1P18608 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgn1P18608 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgn1P18608 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Hmgn1P18608 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Hmgn1P18608 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.11■□□□□ 0.01
Hmgn1P18608 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.11■□□□□ 0.01
Hmgn1P18608 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.11■□□□□ 0.01
Hmgn1P18608 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.11■□□□□ 0.01
Hmgn1P18608 Il3ra-202ENSMUST00000223589 738 ntBASIC15.11■□□□□ 0.01
Hmgn1P18608 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.11■□□□□ 0.01
Hmgn1P18608 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Hmgn1P18608 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgn1P18608 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hmgn1P18608 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgn1P18608 Gm18958-201ENSMUST00000174258 762 ntBASIC15.1■□□□□ 0.01
Hmgn1P18608 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.1■□□□□ 0.01
Hmgn1P18608 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.1■□□□□ 0.01
Hmgn1P18608 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Hmgn1P18608 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgn1P18608 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgn1P18608 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn1P18608 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgn1P18608 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms