Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd44P15379 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd44P15379 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.33■□□□□ 0.37
Cd44P15379 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.33■□□□□ 0.37
Cd44P15379 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd44P15379 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Cd44P15379 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd44P15379 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd44P15379 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.33■□□□□ 0.36
Cd44P15379 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.33■□□□□ 0.36
Cd44P15379 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.33■□□□□ 0.36
Cd44P15379 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd44P15379 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd44P15379 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Cd44P15379 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd44P15379 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.33■□□□□ 0.36
Cd44P15379 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.33■□□□□ 0.36
Cd44P15379 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cd44P15379 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd44P15379 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd44P15379 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cd44P15379 Actl10-202ENSMUST00000226583 1501 ntBASIC17.32■□□□□ 0.36
Cd44P15379 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.32■□□□□ 0.36
Cd44P15379 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cd44P15379 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.32■□□□□ 0.36
Cd44P15379 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Gm715-201ENSMUST00000117865 831 ntBASIC17.32■□□□□ 0.36
Cd44P15379 Gm13186-201ENSMUST00000118031 316 ntBASIC17.32■□□□□ 0.36
Cd44P15379 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.32■□□□□ 0.36
Cd44P15379 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Cd44P15379 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.32■□□□□ 0.36
Cd44P15379 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cd44P15379 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.32■□□□□ 0.36
Cd44P15379 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd44P15379 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cd44P15379 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Cd44P15379 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.31■□□□□ 0.36
Cd44P15379 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Gm20760-201ENSMUST00000179197 648 ntBASIC17.31■□□□□ 0.36
Cd44P15379 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.31■□□□□ 0.36
Cd44P15379 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cd44P15379 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.31■□□□□ 0.36
Cd44P15379 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.31■□□□□ 0.36
Cd44P15379 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd44P15379 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Cd44P15379 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cd44P15379 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.3■□□□□ 0.36
Cd44P15379 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Odf3b-204ENSMUST00000227834 930 ntBASIC17.3■□□□□ 0.36
Cd44P15379 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Cd44P15379 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Prob1-201ENSMUST00000097619 3021 ntBASIC17.3■□□□□ 0.36
Cd44P15379 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Cd44P15379 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.3■□□□□ 0.36
Cd44P15379 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd44P15379 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cd44P15379 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd44P15379 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms