Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.82■□□□□ 0.12
Cntn1P12960 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Gm18669-201ENSMUST00000216049 778 ntBASIC15.82■□□□□ 0.12
Cntn1P12960 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cntn1P12960 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cntn1P12960 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.81■□□□□ 0.12
Cntn1P12960 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cntn1P12960 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cntn1P12960 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.81■□□□□ 0.12
Cntn1P12960 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Cntn1P12960 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cntn1P12960 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cntn1P12960 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Cntn1P12960 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cntn1P12960 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Gm27357-201ENSMUST00000183754 135 ntBASIC15.8■□□□□ 0.12
Cntn1P12960 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cntn1P12960 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cntn1P12960 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.79■□□□□ 0.12
Cntn1P12960 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cntn1P12960 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cntn1P12960 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cntn1P12960 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.79■□□□□ 0.12
Cntn1P12960 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.79■□□□□ 0.12
Cntn1P12960 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.79■□□□□ 0.12
Cntn1P12960 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Cntn1P12960 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.79■□□□□ 0.12
Cntn1P12960 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cntn1P12960 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cntn1P12960 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cntn1P12960 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cntn1P12960 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.78■□□□□ 0.12
Cntn1P12960 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.78■□□□□ 0.12
Cntn1P12960 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.78■□□□□ 0.12
Cntn1P12960 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.78■□□□□ 0.12
Cntn1P12960 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.78■□□□□ 0.12
Cntn1P12960 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cntn1P12960 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms