Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl1P12850 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl1P12850 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl1P12850 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl1P12850 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl1P12850 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Cxcl1P12850 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.69□□□□□ -0.22
Cxcl1P12850 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.68□□□□□ -0.22
Cxcl1P12850 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cxcl1P12850 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Cxcl1P12850 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cxcl1P12850 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.68□□□□□ -0.22
Cxcl1P12850 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cxcl1P12850 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.68□□□□□ -0.22
Cxcl1P12850 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl1P12850 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cxcl1P12850 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cxcl1P12850 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.67□□□□□ -0.22
Cxcl1P12850 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.67□□□□□ -0.22
Cxcl1P12850 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.67□□□□□ -0.22
Cxcl1P12850 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cxcl1P12850 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.67□□□□□ -0.22
Cxcl1P12850 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cxcl1P12850 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.67□□□□□ -0.22
Cxcl1P12850 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl1P12850 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cxcl1P12850 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl1P12850 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.66□□□□□ -0.22
Cxcl1P12850 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl1P12850 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms