Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smim1P0C8K7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Smim1P0C8K7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Smim1P0C8K7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.4□□□□□ -0.58
Smim1P0C8K7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Smim1P0C8K7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smim1P0C8K7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smim1P0C8K7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Smim1P0C8K7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms