Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vti1aO89116 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.77■□□□□ 0.44
Vti1aO89116 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Vti1aO89116 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Vti1aO89116 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
Vti1aO89116 Gm27000-201ENSMUST00000182943 842 ntBASIC17.77■□□□□ 0.44
Vti1aO89116 Gm28659-201ENSMUST00000188013 759 ntBASIC17.77■□□□□ 0.44
Vti1aO89116 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.77■□□□□ 0.44
Vti1aO89116 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vti1aO89116 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Vti1aO89116 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vti1aO89116 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vti1aO89116 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Vti1aO89116 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.76■□□□□ 0.43
Vti1aO89116 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1aO89116 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Vti1aO89116 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1aO89116 Gm15794-201ENSMUST00000120182 631 ntBASIC17.76■□□□□ 0.43
Vti1aO89116 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Vti1aO89116 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.76■□□□□ 0.43
Vti1aO89116 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1aO89116 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Vti1aO89116 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Vti1aO89116 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1aO89116 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1aO89116 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vti1aO89116 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1aO89116 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vti1aO89116 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1aO89116 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.75■□□□□ 0.43
Vti1aO89116 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1aO89116 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vti1aO89116 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1aO89116 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Vti1aO89116 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.75■□□□□ 0.43
Vti1aO89116 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.75■□□□□ 0.43
Vti1aO89116 Gm5864-201ENSMUST00000202263 970 ntBASIC17.75■□□□□ 0.43
Vti1aO89116 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.75■□□□□ 0.43
Vti1aO89116 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.75■□□□□ 0.43
Vti1aO89116 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vti1aO89116 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vti1aO89116 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1aO89116 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vti1aO89116 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Vti1aO89116 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Vti1aO89116 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.74■□□□□ 0.43
Vti1aO89116 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
Vti1aO89116 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Gm34391-201ENSMUST00000203706 907 ntBASIC17.74■□□□□ 0.43
Vti1aO89116 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Birc2-201ENSMUST00000054878 378 ntBASIC17.74■□□□□ 0.43
Vti1aO89116 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vti1aO89116 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vti1aO89116 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vti1aO89116 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vti1aO89116 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vti1aO89116 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vti1aO89116 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.73■□□□□ 0.43
Vti1aO89116 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.73■□□□□ 0.43
Vti1aO89116 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.73■□□□□ 0.43
Vti1aO89116 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vti1aO89116 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vti1aO89116 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vti1aO89116 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms