Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Syn1O88935 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Syn1O88935 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.95■□□□□ 0.3
Syn1O88935 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.95■□□□□ 0.3
Syn1O88935 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.95■□□□□ 0.3
Syn1O88935 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.95■□□□□ 0.3
Syn1O88935 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Syn1O88935 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.95■□□□□ 0.3
Syn1O88935 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.95■□□□□ 0.3
Syn1O88935 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Syn1O88935 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.94■□□□□ 0.3
Syn1O88935 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.94■□□□□ 0.3
Syn1O88935 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Syn1O88935 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.94■□□□□ 0.3
Syn1O88935 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Syn1O88935 Gm44430-201ENSMUST00000203376 995 ntBASIC16.94■□□□□ 0.3
Syn1O88935 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.94■□□□□ 0.3
Syn1O88935 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Syn1O88935 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.94■□□□□ 0.3
Syn1O88935 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.94■□□□□ 0.3
Syn1O88935 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.94■□□□□ 0.3
Syn1O88935 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Syn1O88935 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.94■□□□□ 0.3
Syn1O88935 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Syn1O88935 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.93■□□□□ 0.3
Syn1O88935 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Syn1O88935 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.93■□□□□ 0.3
Syn1O88935 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Syn1O88935 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.92■□□□□ 0.3
Syn1O88935 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.92■□□□□ 0.3
Syn1O88935 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.92■□□□□ 0.3
Syn1O88935 Mir6956-201ENSMUST00000183598 62 ntBASIC16.92■□□□□ 0.3
Syn1O88935 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.92■□□□□ 0.3
Syn1O88935 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.92■□□□□ 0.3
Syn1O88935 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Syn1O88935 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.92■□□□□ 0.3
Syn1O88935 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Syn1O88935 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms