Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Hcn3O88705 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.85■□□□□ 0.13
Hcn3O88705 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.85■□□□□ 0.13
Hcn3O88705 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.85■□□□□ 0.13
Hcn3O88705 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.85■□□□□ 0.13
Hcn3O88705 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Hcn3O88705 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Hcn3O88705 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Hcn3O88705 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.84■□□□□ 0.13
Hcn3O88705 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.84■□□□□ 0.13
Hcn3O88705 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Hcn3O88705 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hcn3O88705 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Hcn3O88705 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.84■□□□□ 0.13
Hcn3O88705 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.84■□□□□ 0.13
Hcn3O88705 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hcn3O88705 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hcn3O88705 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hcn3O88705 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.83■□□□□ 0.13
Hcn3O88705 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Hcn3O88705 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn3O88705 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn3O88705 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn3O88705 Gm13158-201ENSMUST00000122007 736 ntBASIC15.83■□□□□ 0.12
Hcn3O88705 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.83■□□□□ 0.12
Hcn3O88705 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn3O88705 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.83■□□□□ 0.12
Hcn3O88705 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Hcn3O88705 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn3O88705 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.83■□□□□ 0.12
Hcn3O88705 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn3O88705 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn3O88705 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hcn3O88705 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Hcn3O88705 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hcn3O88705 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.82■□□□□ 0.12
Hcn3O88705 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.82■□□□□ 0.12
Hcn3O88705 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Hcn3O88705 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hcn3O88705 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Hcn3O88705 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.81■□□□□ 0.12
Hcn3O88705 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Hcn3O88705 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn3O88705 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn3O88705 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn3O88705 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn3O88705 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn3O88705 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn3O88705 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn3O88705 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Hcn3O88705 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hcn3O88705 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn3O88705 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.8■□□□□ 0.12
Hcn3O88705 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn3O88705 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn3O88705 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn3O88705 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn3O88705 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hcn3O88705 Gm6576-201ENSMUST00000169678 883 ntBASIC15.8■□□□□ 0.12
Hcn3O88705 Gm18666-201ENSMUST00000190039 958 ntBASIC15.8■□□□□ 0.12
Hcn3O88705 Gm10138-203ENSMUST00000206952 366 ntBASIC15.8■□□□□ 0.12
Hcn3O88705 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms