Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Lmx1bO88609 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lmx1bO88609 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lmx1bO88609 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.94□□□□□ -0.02
Lmx1bO88609 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lmx1bO88609 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lmx1bO88609 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Lmx1bO88609 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lmx1bO88609 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.94□□□□□ -0.02
Lmx1bO88609 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Lmx1bO88609 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lmx1bO88609 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Lmx1bO88609 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Lmx1bO88609 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.93□□□□□ -0.02
Lmx1bO88609 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.93□□□□□ -0.02
Lmx1bO88609 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Lmx1bO88609 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Lmx1bO88609 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.92□□□□□ -0.02
Lmx1bO88609 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.92□□□□□ -0.02
Lmx1bO88609 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.92□□□□□ -0.02
Lmx1bO88609 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Lmx1bO88609 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.92□□□□□ -0.02
Lmx1bO88609 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Lmx1bO88609 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.92□□□□□ -0.02
Lmx1bO88609 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Lmx1bO88609 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lmx1bO88609 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.91□□□□□ -0.02
Lmx1bO88609 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.91□□□□□ -0.02
Lmx1bO88609 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Lmx1bO88609 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.91□□□□□ -0.02
Lmx1bO88609 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Lmx1bO88609 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Lmx1bO88609 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Lmx1bO88609 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.9□□□□□ -0.02
Lmx1bO88609 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Lmx1bO88609 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Gm15794-201ENSMUST00000120182 631 ntBASIC14.9□□□□□ -0.02
Lmx1bO88609 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Lmx1bO88609 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.9□□□□□ -0.02
Lmx1bO88609 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.9□□□□□ -0.02
Lmx1bO88609 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Lmx1bO88609 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.9□□□□□ -0.02
Lmx1bO88609 Gm27357-201ENSMUST00000183754 135 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms