Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cacna1hO88427 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Gm8825-201ENSMUST00000182565 998 ntBASIC16.01■□□□□ 0.15
Cacna1hO88427 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cacna1hO88427 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cacna1hO88427 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cacna1hO88427 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Cacna1hO88427 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16■□□□□ 0.15
Cacna1hO88427 Gm13597-201ENSMUST00000121239 375 ntBASIC16■□□□□ 0.15
Cacna1hO88427 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16■□□□□ 0.15
Cacna1hO88427 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cacna1hO88427 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cacna1hO88427 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Cacna1hO88427 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Gm7336-201ENSMUST00000107041 1232 ntBASIC16■□□□□ 0.15
Cacna1hO88427 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16■□□□□ 0.15
Cacna1hO88427 Gm27300-201ENSMUST00000184085 97 ntBASIC16■□□□□ 0.15
Cacna1hO88427 Gm27335-201ENSMUST00000184758 97 ntBASIC16■□□□□ 0.15
Cacna1hO88427 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16■□□□□ 0.15
Cacna1hO88427 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Cacna1hO88427 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cacna1hO88427 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16■□□□□ 0.15
Cacna1hO88427 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16■□□□□ 0.15
Cacna1hO88427 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cacna1hO88427 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cacna1hO88427 Grk6-207ENSMUST00000225925 2769 ntBASIC15.99■□□□□ 0.15
Cacna1hO88427 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.99■□□□□ 0.15
Cacna1hO88427 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Gm15427-201ENSMUST00000117288 531 ntBASIC15.99■□□□□ 0.15
Cacna1hO88427 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.99■□□□□ 0.15
Cacna1hO88427 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cacna1hO88427 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cacna1hO88427 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cacna1hO88427 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.98■□□□□ 0.15
Cacna1hO88427 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cacna1hO88427 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cacna1hO88427 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cacna1hO88427 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.98■□□□□ 0.15
Cacna1hO88427 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cacna1hO88427 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.98■□□□□ 0.15
Cacna1hO88427 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.98■□□□□ 0.15
Cacna1hO88427 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.98■□□□□ 0.15
Cacna1hO88427 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Cacna1hO88427 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.97■□□□□ 0.15
Cacna1hO88427 Gm13365-201ENSMUST00000121188 973 ntBASIC15.97■□□□□ 0.15
Cacna1hO88427 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cacna1hO88427 Gm25948-201ENSMUST00000175334 112 ntBASIC15.97■□□□□ 0.15
Cacna1hO88427 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms