Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.06■□□□□ 0.96
Tnnt1O88346 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnnt1O88346 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnnt1O88346 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnnt1O88346 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC21.05■□□□□ 0.96
Tnnt1O88346 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Gm15442-201ENSMUST00000117905 1527 ntBASIC21.05■□□□□ 0.96
Tnnt1O88346 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tnnt1O88346 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.05■□□□□ 0.96
Tnnt1O88346 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.05■□□□□ 0.96
Tnnt1O88346 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tnnt1O88346 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnnt1O88346 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Tnnt1O88346 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.04■□□□□ 0.96
Tnnt1O88346 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.04■□□□□ 0.96
Tnnt1O88346 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tnnt1O88346 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Tnnt1O88346 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
Tnnt1O88346 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Gm43338-201ENSMUST00000198617 2223 ntBASIC21.04■□□□□ 0.96
Tnnt1O88346 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnnt1O88346 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tnnt1O88346 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.03■□□□□ 0.96
Tnnt1O88346 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Gm10052-201ENSMUST00000168019 960 ntBASIC21.03■□□□□ 0.96
Tnnt1O88346 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Tnnt1O88346 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Gm7729-201ENSMUST00000050143 801 ntBASIC21.03■□□□□ 0.96
Tnnt1O88346 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.03■□□□□ 0.96
Tnnt1O88346 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.03■□□□□ 0.96
Tnnt1O88346 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnnt1O88346 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.02■□□□□ 0.96
Tnnt1O88346 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tnnt1O88346 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Tnnt1O88346 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Tnnt1O88346 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Tnnt1O88346 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tnnt1O88346 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC21.02■□□□□ 0.96
Tnnt1O88346 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnnt1O88346 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.02■□□□□ 0.96
Tnnt1O88346 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.02■□□□□ 0.96
Tnnt1O88346 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tnnt1O88346 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Tnnt1O88346 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnnt1O88346 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC21.01■□□□□ 0.95
Tnnt1O88346 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC21.01■□□□□ 0.95
Tnnt1O88346 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnnt1O88346 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC21.01■□□□□ 0.95
Tnnt1O88346 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.01■□□□□ 0.95
Tnnt1O88346 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnnt1O88346 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnnt1O88346 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnnt1O88346 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnnt1O88346 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnnt1O88346 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnnt1O88346 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnnt1O88346 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21■□□□□ 0.95
Tnnt1O88346 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms