Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfdp1O88271 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfdp1O88271 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cfdp1O88271 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfdp1O88271 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cfdp1O88271 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.54■□□□□ 0.88
Cfdp1O88271 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cfdp1O88271 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cfdp1O88271 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Cfdp1O88271 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cfdp1O88271 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cfdp1O88271 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cfdp1O88271 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cfdp1O88271 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
Cfdp1O88271 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.54■□□□□ 0.88
Cfdp1O88271 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.54■□□□□ 0.88
Cfdp1O88271 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.54■□□□□ 0.88
Cfdp1O88271 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.54■□□□□ 0.88
Cfdp1O88271 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Cfdp1O88271 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.53■□□□□ 0.88
Cfdp1O88271 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.53■□□□□ 0.88
Cfdp1O88271 Gm10052-201ENSMUST00000168019 960 ntBASIC20.53■□□□□ 0.88
Cfdp1O88271 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.53■□□□□ 0.88
Cfdp1O88271 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Gm7729-201ENSMUST00000050143 801 ntBASIC20.53■□□□□ 0.88
Cfdp1O88271 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Cfdp1O88271 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cfdp1O88271 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.53■□□□□ 0.88
Cfdp1O88271 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cfdp1O88271 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cfdp1O88271 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cfdp1O88271 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cfdp1O88271 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cfdp1O88271 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Cfdp1O88271 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.52■□□□□ 0.88
Cfdp1O88271 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfdp1O88271 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfdp1O88271 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfdp1O88271 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cfdp1O88271 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cfdp1O88271 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cfdp1O88271 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cfdp1O88271 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfdp1O88271 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cfdp1O88271 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cfdp1O88271 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.51■□□□□ 0.87
Cfdp1O88271 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.51■□□□□ 0.87
Cfdp1O88271 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cfdp1O88271 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.51■□□□□ 0.87
Cfdp1O88271 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfdp1O88271 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.51■□□□□ 0.87
Cfdp1O88271 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Cfdp1O88271 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfdp1O88271 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfdp1O88271 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfdp1O88271 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cfdp1O88271 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cfdp1O88271 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.51■□□□□ 0.87
Cfdp1O88271 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Gm44430-201ENSMUST00000203376 995 ntBASIC20.5■□□□□ 0.87
Cfdp1O88271 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Cfdp1O88271 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cfdp1O88271 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cfdp1O88271 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cfdp1O88271 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cfdp1O88271 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms