Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC10.06□□□□□ -0.8
Gm10139O88245 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Gm10139O88245 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.06□□□□□ -0.8
Gm10139O88245 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Gm27463-201ENSMUST00000183569 57 ntBASIC10.06□□□□□ -0.8
Gm10139O88245 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.06□□□□□ -0.8
Gm10139O88245 Gm18115-201ENSMUST00000221209 621 ntBASIC10.06□□□□□ -0.8
Gm10139O88245 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Gm10139O88245 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Gm10139O88245 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Gm10139O88245 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC10.06□□□□□ -0.8
Gm10139O88245 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Gm10139O88245 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.05□□□□□ -0.8
Gm10139O88245 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Gm10139O88245 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm10139O88245 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Gm10139O88245 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC10.05□□□□□ -0.8
Gm10139O88245 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Gm8520-201ENSMUST00000186517 868 ntBASIC10.05□□□□□ -0.8
Gm10139O88245 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC10.05□□□□□ -0.8
Gm10139O88245 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
Gm10139O88245 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC10.05□□□□□ -0.8
Gm10139O88245 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Gm10139O88245 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC10.05□□□□□ -0.8
Gm10139O88245 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Gm10139O88245 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Gm19430-201ENSMUST00000193847 2137 ntBASIC10.04□□□□□ -0.8
Gm10139O88245 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm10139O88245 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC10.04□□□□□ -0.8
Gm10139O88245 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
Gm10139O88245 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.04□□□□□ -0.8
Gm10139O88245 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm10139O88245 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.04□□□□□ -0.8
Gm10139O88245 Gm43353-201ENSMUST00000199224 1295 ntBASIC10.04□□□□□ -0.8
Gm10139O88245 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm10139O88245 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC10.04□□□□□ -0.8
Gm10139O88245 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Phf7-203ENSMUST00000226565 1971 ntBASIC10.04□□□□□ -0.8
Gm10139O88245 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Gm10139O88245 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC10.04□□□□□ -0.8
Gm10139O88245 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Gm10139O88245 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Gm10139O88245 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms