Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pknox1O70477 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pknox1O70477 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pknox1O70477 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pknox1O70477 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.42■□□□□ 0.22
Pknox1O70477 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.41■□□□□ 0.22
Pknox1O70477 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pknox1O70477 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Pknox1O70477 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.41■□□□□ 0.22
Pknox1O70477 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.41■□□□□ 0.22
Pknox1O70477 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pknox1O70477 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.4■□□□□ 0.22
Pknox1O70477 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.4■□□□□ 0.22
Pknox1O70477 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.4■□□□□ 0.22
Pknox1O70477 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pknox1O70477 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pknox1O70477 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.4■□□□□ 0.22
Pknox1O70477 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pknox1O70477 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Pknox1O70477 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pknox1O70477 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pknox1O70477 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Gm27463-201ENSMUST00000183569 57 ntBASIC16.39■□□□□ 0.21
Pknox1O70477 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pknox1O70477 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.39■□□□□ 0.21
Pknox1O70477 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pknox1O70477 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pknox1O70477 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pknox1O70477 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Mir5122-201ENSMUST00000175004 89 ntBASIC16.38■□□□□ 0.21
Pknox1O70477 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pknox1O70477 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pknox1O70477 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.38■□□□□ 0.21
Pknox1O70477 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pknox1O70477 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pknox1O70477 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pknox1O70477 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pknox1O70477 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pknox1O70477 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pknox1O70477 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pknox1O70477 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms