Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pdlim1O70400 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.28■□□□□ 0.2
Pdlim1O70400 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.28■□□□□ 0.2
Pdlim1O70400 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Pdlim1O70400 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.28■□□□□ 0.2
Pdlim1O70400 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pdlim1O70400 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pdlim1O70400 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Pdlim1O70400 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.27■□□□□ 0.2
Pdlim1O70400 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pdlim1O70400 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pdlim1O70400 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim1O70400 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pdlim1O70400 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Pdlim1O70400 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.26■□□□□ 0.19
Pdlim1O70400 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pdlim1O70400 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pdlim1O70400 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim1O70400 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.25■□□□□ 0.19
Pdlim1O70400 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.25■□□□□ 0.19
Pdlim1O70400 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.25■□□□□ 0.19
Pdlim1O70400 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.25■□□□□ 0.19
Pdlim1O70400 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Pdlim1O70400 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Gm36967-201ENSMUST00000193814 266 ntBASIC16.25■□□□□ 0.19
Pdlim1O70400 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.25■□□□□ 0.19
Pdlim1O70400 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.25■□□□□ 0.19
Pdlim1O70400 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim1O70400 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pdlim1O70400 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.24■□□□□ 0.19
Pdlim1O70400 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pdlim1O70400 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pdlim1O70400 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pdlim1O70400 Gm33142-201ENSMUST00000193913 867 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms