Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.44■□□□□ 0.38
Pja1O55176 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.44■□□□□ 0.38
Pja1O55176 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Pja1O55176 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pja1O55176 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pja1O55176 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pja1O55176 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pja1O55176 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pja1O55176 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.43■□□□□ 0.38
Pja1O55176 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.43■□□□□ 0.38
Pja1O55176 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.43■□□□□ 0.38
Pja1O55176 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.43■□□□□ 0.38
Pja1O55176 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.43■□□□□ 0.38
Pja1O55176 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pja1O55176 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pja1O55176 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pja1O55176 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pja1O55176 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pja1O55176 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.43■□□□□ 0.38
Pja1O55176 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Gm13186-201ENSMUST00000118031 316 ntBASIC17.42■□□□□ 0.38
Pja1O55176 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pja1O55176 Odf3b-204ENSMUST00000227834 930 ntBASIC17.42■□□□□ 0.38
Pja1O55176 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pja1O55176 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.42■□□□□ 0.38
Pja1O55176 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pja1O55176 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pja1O55176 Actl10-202ENSMUST00000226583 1501 ntBASIC17.42■□□□□ 0.38
Pja1O55176 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pja1O55176 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pja1O55176 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pja1O55176 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Pja1O55176 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pja1O55176 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Pja1O55176 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pja1O55176 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Pja1O55176 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pja1O55176 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.41■□□□□ 0.38
Pja1O55176 Gm3375-201ENSMUST00000203929 796 ntBASIC17.41■□□□□ 0.38
Pja1O55176 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pja1O55176 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pja1O55176 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.41■□□□□ 0.38
Pja1O55176 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Pja1O55176 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pja1O55176 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.4■□□□□ 0.38
Pja1O55176 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pja1O55176 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.4■□□□□ 0.38
Pja1O55176 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Pja1O55176 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.4■□□□□ 0.38
Pja1O55176 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pja1O55176 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pja1O55176 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pja1O55176 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pja1O55176 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pja1O55176 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Pja1O55176 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pja1O55176 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.39■□□□□ 0.37
Pja1O55176 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pja1O55176 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pja1O55176 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pja1O55176 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pja1O55176 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pja1O55176 Gm20760-201ENSMUST00000179197 648 ntBASIC17.39■□□□□ 0.37
Pja1O55176 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pja1O55176 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pja1O55176 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.39■□□□□ 0.37
Pja1O55176 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.39■□□□□ 0.37
Pja1O55176 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pja1O55176 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms