Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpl35aO55142 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rpl35aO55142 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rpl35aO55142 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Gm7367-201ENSMUST00000057611 492 ntBASIC12.31□□□□□ -0.44
Rpl35aO55142 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.31□□□□□ -0.44
Rpl35aO55142 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpl35aO55142 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rpl35aO55142 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.31□□□□□ -0.44
Rpl35aO55142 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.31□□□□□ -0.44
Rpl35aO55142 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpl35aO55142 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpl35aO55142 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpl35aO55142 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpl35aO55142 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Gm25016-201ENSMUST00000158399 131 ntBASIC12.3□□□□□ -0.44
Rpl35aO55142 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rpl35aO55142 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpl35aO55142 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.3□□□□□ -0.44
Rpl35aO55142 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rpl35aO55142 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.3□□□□□ -0.44
Rpl35aO55142 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rpl35aO55142 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rpl35aO55142 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.29□□□□□ -0.44
Rpl35aO55142 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpl35aO55142 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpl35aO55142 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Rpl35aO55142 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.29□□□□□ -0.44
Rpl35aO55142 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rpl35aO55142 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.29□□□□□ -0.44
Rpl35aO55142 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rpl35aO55142 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rpl35aO55142 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms