Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cntnap1O54991 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cntnap1O54991 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Cntnap1O54991 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cntnap1O54991 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
Cntnap1O54991 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cntnap1O54991 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cntnap1O54991 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC21.26■□□□□ 0.99
Cntnap1O54991 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cntnap1O54991 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.26■□□□□ 0.99
Cntnap1O54991 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.26■□□□□ 0.99
Cntnap1O54991 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cntnap1O54991 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Cntnap1O54991 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap1O54991 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap1O54991 Gm13223-201ENSMUST00000118609 747 ntBASIC21.25■□□□□ 0.99
Cntnap1O54991 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cntnap1O54991 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap1O54991 Gm10253-201ENSMUST00000194270 940 ntBASIC21.25■□□□□ 0.99
Cntnap1O54991 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap1O54991 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap1O54991 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cntnap1O54991 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap1O54991 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap1O54991 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cntnap1O54991 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cntnap1O54991 Gm11185-201ENSMUST00000117732 1007 ntBASIC21.24■□□□□ 0.99
Cntnap1O54991 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cntnap1O54991 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cntnap1O54991 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC21.24■□□□□ 0.99
Cntnap1O54991 AC132467.2-202ENSMUST00000227726 559 ntBASIC21.24■□□□□ 0.99
Cntnap1O54991 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cntnap1O54991 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cntnap1O54991 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cntnap1O54991 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Cntnap1O54991 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC21.23■□□□□ 0.99
Cntnap1O54991 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC21.23■□□□□ 0.99
Cntnap1O54991 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC21.23■□□□□ 0.99
Cntnap1O54991 Gm18187-201ENSMUST00000196476 984 ntBASIC21.23■□□□□ 0.99
Cntnap1O54991 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC21.23■□□□□ 0.99
Cntnap1O54991 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC21.23■□□□□ 0.99
Cntnap1O54991 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cntnap1O54991 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC21.23■□□□□ 0.99
Cntnap1O54991 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC21.23■□□□□ 0.99
Cntnap1O54991 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC21.23■□□□□ 0.99
Cntnap1O54991 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC21.23■□□□□ 0.99
Cntnap1O54991 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 AC117588.1-201ENSMUST00000228510 999 ntBASIC21.23■□□□□ 0.99
Cntnap1O54991 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cntnap1O54991 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.22■□□□□ 0.99
Cntnap1O54991 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cntnap1O54991 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cntnap1O54991 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC21.22■□□□□ 0.99
Cntnap1O54991 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC21.22■□□□□ 0.99
Cntnap1O54991 Gm43433-201ENSMUST00000196573 481 ntBASIC21.22■□□□□ 0.99
Cntnap1O54991 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC21.22■□□□□ 0.99
Cntnap1O54991 AC125350.2-201ENSMUST00000224737 727 ntBASIC21.22■□□□□ 0.99
Cntnap1O54991 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cntnap1O54991 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cntnap1O54991 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cntnap1O54991 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cntnap1O54991 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cntnap1O54991 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cntnap1O54991 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC21.21■□□□□ 0.99
Cntnap1O54991 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC21.21■□□□□ 0.99
Cntnap1O54991 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cntnap1O54991 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cntnap1O54991 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC21.21■□□□□ 0.99
Cntnap1O54991 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cntnap1O54991 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC21.21■□□□□ 0.99
Cntnap1O54991 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms