Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Rnf13O54965 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf13O54965 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf13O54965 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf13O54965 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rnf13O54965 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf13O54965 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf13O54965 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Rnf13O54965 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.99□□□□□ -0.01
Rnf13O54965 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Rnf13O54965 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf13O54965 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf13O54965 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rnf13O54965 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf13O54965 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf13O54965 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf13O54965 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rnf13O54965 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.98□□□□□ -0.01
Rnf13O54965 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Rnf13O54965 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.98□□□□□ -0.01
Rnf13O54965 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rnf13O54965 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rnf13O54965 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf13O54965 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rnf13O54965 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rnf13O54965 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf13O54965 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf13O54965 Gm37856-201ENSMUST00000191634 999 ntBASIC14.97□□□□□ -0.01
Rnf13O54965 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.97□□□□□ -0.01
Rnf13O54965 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf13O54965 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Rnf13O54965 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.97□□□□□ -0.01
Rnf13O54965 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rnf13O54965 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf13O54965 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf13O54965 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf13O54965 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf13O54965 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Rnf13O54965 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf13O54965 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms