Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarce1O54941 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarce1O54941 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Smarce1O54941 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.62■□□□□ 0.73
Smarce1O54941 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smarce1O54941 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smarce1O54941 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smarce1O54941 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smarce1O54941 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarce1O54941 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smarce1O54941 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Smarce1O54941 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Smarce1O54941 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.6■□□□□ 0.73
Smarce1O54941 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Smarce1O54941 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.6■□□□□ 0.73
Smarce1O54941 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Smarce1O54941 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarce1O54941 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Smarce1O54941 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarce1O54941 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Smarce1O54941 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Smarce1O54941 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.59■□□□□ 0.73
Smarce1O54941 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.59■□□□□ 0.73
Smarce1O54941 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarce1O54941 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Smarce1O54941 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarce1O54941 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smarce1O54941 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarce1O54941 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarce1O54941 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarce1O54941 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarce1O54941 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Smarce1O54941 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarce1O54941 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Smarce1O54941 Actl10-202ENSMUST00000226583 1501 ntBASIC19.58■□□□□ 0.73
Smarce1O54941 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarce1O54941 Gm3375-201ENSMUST00000203929 796 ntBASIC19.58■□□□□ 0.72
Smarce1O54941 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarce1O54941 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.58■□□□□ 0.72
Smarce1O54941 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarce1O54941 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarce1O54941 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarce1O54941 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Smarce1O54941 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.57■□□□□ 0.72
Smarce1O54941 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarce1O54941 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.57■□□□□ 0.72
Smarce1O54941 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms