Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccr6O54689 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.9□□□□□ -0.18
Ccr6O54689 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Ccr6O54689 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ccr6O54689 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.9□□□□□ -0.18
Ccr6O54689 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.9□□□□□ -0.18
Ccr6O54689 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ccr6O54689 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Ccr6O54689 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccr6O54689 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccr6O54689 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.89□□□□□ -0.19
Ccr6O54689 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccr6O54689 Gm6365-201ENSMUST00000054711 744 ntBASIC13.89□□□□□ -0.19
Ccr6O54689 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.89□□□□□ -0.19
Ccr6O54689 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ccr6O54689 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ccr6O54689 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccr6O54689 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.89□□□□□ -0.19
Ccr6O54689 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccr6O54689 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Ccr6O54689 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccr6O54689 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.88□□□□□ -0.19
Ccr6O54689 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccr6O54689 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.88□□□□□ -0.19
Ccr6O54689 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccr6O54689 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.88□□□□□ -0.19
Ccr6O54689 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Ccr6O54689 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccr6O54689 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ccr6O54689 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccr6O54689 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Ccr6O54689 Gm15375-201ENSMUST00000119510 849 ntBASIC13.87□□□□□ -0.19
Ccr6O54689 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccr6O54689 Gm5408-201ENSMUST00000197998 747 ntBASIC13.87□□□□□ -0.19
Ccr6O54689 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccr6O54689 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccr6O54689 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccr6O54689 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccr6O54689 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms