Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scamp3O35609 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.44■□□□□ 0.22
Scamp3O35609 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scamp3O35609 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scamp3O35609 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scamp3O35609 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scamp3O35609 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scamp3O35609 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scamp3O35609 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Scamp3O35609 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Scamp3O35609 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scamp3O35609 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Scamp3O35609 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scamp3O35609 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scamp3O35609 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Scamp3O35609 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scamp3O35609 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.43■□□□□ 0.22
Scamp3O35609 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.43■□□□□ 0.22
Scamp3O35609 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Scamp3O35609 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scamp3O35609 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.43■□□□□ 0.22
Scamp3O35609 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scamp3O35609 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.43■□□□□ 0.22
Scamp3O35609 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scamp3O35609 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Scamp3O35609 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.42■□□□□ 0.22
Scamp3O35609 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.42■□□□□ 0.22
Scamp3O35609 Gm11950-201ENSMUST00000121615 838 ntBASIC16.42■□□□□ 0.22
Scamp3O35609 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.42■□□□□ 0.22
Scamp3O35609 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Scamp3O35609 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.42■□□□□ 0.22
Scamp3O35609 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scamp3O35609 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.41■□□□□ 0.22
Scamp3O35609 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Gm27704-201ENSMUST00000185094 107 ntBASIC16.41■□□□□ 0.22
Scamp3O35609 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.41■□□□□ 0.22
Scamp3O35609 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scamp3O35609 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scamp3O35609 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Scamp3O35609 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.41■□□□□ 0.22
Scamp3O35609 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.41■□□□□ 0.22
Scamp3O35609 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scamp3O35609 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scamp3O35609 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scamp3O35609 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.4■□□□□ 0.22
Scamp3O35609 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scamp3O35609 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.4■□□□□ 0.22
Scamp3O35609 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scamp3O35609 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Scamp3O35609 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Scamp3O35609 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scamp3O35609 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Scamp3O35609 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scamp3O35609 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scamp3O35609 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scamp3O35609 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scamp3O35609 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Scamp3O35609 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Scamp3O35609 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms