Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Capn1O35350 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Capn1O35350 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Capn1O35350 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.28■□□□□ 0.04
Capn1O35350 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Capn1O35350 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.28■□□□□ 0.04
Capn1O35350 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Capn1O35350 Gm37722-201ENSMUST00000193757 208 ntBASIC15.28■□□□□ 0.04
Capn1O35350 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.28■□□□□ 0.04
Capn1O35350 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Capn1O35350 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.27■□□□□ 0.04
Capn1O35350 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Capn1O35350 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.27■□□□□ 0.04
Capn1O35350 Gm28033-201ENSMUST00000184224 96 ntBASIC15.27■□□□□ 0.04
Capn1O35350 Gm17971-201ENSMUST00000190239 806 ntBASIC15.27■□□□□ 0.04
Capn1O35350 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Capn1O35350 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Capn1O35350 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Capn1O35350 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.27■□□□□ 0.03
Capn1O35350 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Capn1O35350 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Capn1O35350 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Capn1O35350 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Capn1O35350 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.27■□□□□ 0.03
Capn1O35350 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Capn1O35350 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Capn1O35350 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Capn1O35350 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Capn1O35350 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.26■□□□□ 0.03
Capn1O35350 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.26■□□□□ 0.03
Capn1O35350 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.26■□□□□ 0.03
Capn1O35350 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Capn1O35350 Gm17807-201ENSMUST00000186869 298 ntBASIC15.26■□□□□ 0.03
Capn1O35350 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Capn1O35350 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Capn1O35350 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Capn1O35350 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Capn1O35350 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.25■□□□□ 0.03
Capn1O35350 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Capn1O35350 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Capn1O35350 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.25■□□□□ 0.03
Capn1O35350 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.25■□□□□ 0.03
Capn1O35350 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Capn1O35350 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Capn1O35350 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Capn1O35350 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Capn1O35350 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Capn1O35350 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Capn1O35350 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Capn1O35350 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Capn1O35350 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Capn1O35350 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Capn1O35350 Mir770-201ENSMUST00000103252 94 ntBASIC15.24■□□□□ 0.03
Capn1O35350 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms