Protein–RNA interactions for Protein: O35324

Sh2d1b, SH2 domain-containing protein 1B, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1bO35324 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1bO35324 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sh2d1bO35324 Mir6404-201ENSMUST00000183699 94 ntBASIC15.3■□□□□ 0.04
Sh2d1bO35324 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1bO35324 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sh2d1bO35324 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1bO35324 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1bO35324 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1bO35324 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1bO35324 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d1bO35324 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Gm7862-201ENSMUST00000121461 292 ntBASIC15.29■□□□□ 0.04
Sh2d1bO35324 Gm11452-201ENSMUST00000122376 690 ntBASIC15.29■□□□□ 0.04
Sh2d1bO35324 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Gm25406-201ENSMUST00000157599 105 ntBASIC15.29■□□□□ 0.04
Sh2d1bO35324 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.29■□□□□ 0.04
Sh2d1bO35324 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Sh2d1bO35324 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Gm6296-201ENSMUST00000222599 943 ntBASIC15.28■□□□□ 0.04
Sh2d1bO35324 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1bO35324 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.27■□□□□ 0.04
Sh2d1bO35324 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.27■□□□□ 0.04
Sh2d1bO35324 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Sh2d1bO35324 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d1bO35324 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d1bO35324 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d1bO35324 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sh2d1bO35324 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d1bO35324 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d1bO35324 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.26■□□□□ 0.03
Sh2d1bO35324 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.26■□□□□ 0.03
Sh2d1bO35324 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Gm6443-201ENSMUST00000203599 874 ntBASIC15.26■□□□□ 0.03
Sh2d1bO35324 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1bO35324 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms