Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Gm7977-201ENSMUST00000193787 748 ntBASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tnfrsf11aO35305 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 AA414768-201ENSMUST00000121924 1257 ntBASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Tnfrsf11aO35305 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf11aO35305 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tnfrsf11aO35305 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Tnfrsf11aO35305 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tnfrsf11aO35305 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Gm29518-201ENSMUST00000190858 372 ntBASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.75■□□□□ 0.43
Tnfrsf11aO35305 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.74■□□□□ 0.43
Tnfrsf11aO35305 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tnfrsf11aO35305 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms