Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp35M0QWN7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Gm6623-201ENSMUST00000173570 544 ntBASIC17.69■□□□□ 0.42
Usp35M0QWN7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp35M0QWN7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.68■□□□□ 0.42
Usp35M0QWN7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Gm28033-201ENSMUST00000184224 96 ntBASIC17.68■□□□□ 0.42
Usp35M0QWN7 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.68■□□□□ 0.42
Usp35M0QWN7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Gm18669-201ENSMUST00000216049 778 ntBASIC17.68■□□□□ 0.42
Usp35M0QWN7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Gm7461-201ENSMUST00000058918 827 ntBASIC17.68■□□□□ 0.42
Usp35M0QWN7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.68■□□□□ 0.42
Usp35M0QWN7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Usp35M0QWN7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.67■□□□□ 0.42
Usp35M0QWN7 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.67■□□□□ 0.42
Usp35M0QWN7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Usp35M0QWN7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.66■□□□□ 0.42
Usp35M0QWN7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Mir770-201ENSMUST00000103252 94 ntBASIC17.66■□□□□ 0.42
Usp35M0QWN7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.66■□□□□ 0.42
Usp35M0QWN7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Usp35M0QWN7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp35M0QWN7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms