Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Gm44450-201ENSMUST00000199528 114 ntBASIC12.62□□□□□ -0.39
Gm10553J3QPF1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm10553J3QPF1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Gm17808-201ENSMUST00000200859 894 ntBASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Gm18421-201ENSMUST00000204122 625 ntBASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.61□□□□□ -0.39
Gm10553J3QPF1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm10553J3QPF1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Gm33142-201ENSMUST00000193913 867 ntBASIC12.6□□□□□ -0.39
Gm10553J3QPF1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.6□□□□□ -0.39
Gm10553J3QPF1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Gm7367-201ENSMUST00000057611 492 ntBASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Gm10553J3QPF1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Gm10553J3QPF1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms