Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm3415J3QMS8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm3415J3QMS8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Gm23634-201ENSMUST00000175071 91 ntBASIC17.6■□□□□ 0.41
Gm3415J3QMS8 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm3415J3QMS8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Gm11336-201ENSMUST00000118168 334 ntBASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Gm3415J3QMS8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Gm3415J3QMS8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3415J3QMS8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3415J3QMS8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Gm3415J3QMS8 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.58■□□□□ 0.41
Gm3415J3QMS8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.58■□□□□ 0.4
Gm3415J3QMS8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Gm7977-201ENSMUST00000193787 748 ntBASIC17.57■□□□□ 0.4
Gm3415J3QMS8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Gm3415J3QMS8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms