Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav13d-3J3QMG8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13d-3J3QMG8 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.52□□□□□ -0.08
Trav13d-3J3QMG8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13d-3J3QMG8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13d-3J3QMG8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13d-3J3QMG8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Gm18032-201ENSMUST00000222541 538 ntBASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13d-3J3QMG8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Gm18101-201ENSMUST00000215769 548 ntBASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13d-3J3QMG8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav13d-3J3QMG8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Gm10231-201ENSMUST00000181584 441 ntBASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Gm29707-201ENSMUST00000196325 491 ntBASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Gm10175-202ENSMUST00000208752 441 ntBASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav13d-3J3QMG8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms