Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Birc2-201ENSMUST00000054878 378 ntBASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm17535J3KMR8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Gm24589-201ENSMUST00000116692 94 ntBASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Gm7153-201ENSMUST00000117092 455 ntBASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm17535J3KMR8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm17535J3KMR8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Gm44454-201ENSMUST00000198541 138 ntBASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.48■□□□□ 0.39
Gm17535J3KMR8 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gm17535J3KMR8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gm17535J3KMR8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms