Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Gm5264-201ENSMUST00000190584 848 ntBASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3tc1G3X9F6 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Gm6550-201ENSMUST00000187574 993 ntBASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 AV026068-213ENSMUST00000223675 1171 ntBASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.93■□□□□ 0.78
Sh3tc1G3X9F6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Gm15467-201ENSMUST00000120582 445 ntBASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.92■□□□□ 0.78
Sh3tc1G3X9F6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Gm6089-201ENSMUST00000197666 938 ntBASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Gm15590-201ENSMUST00000078419 552 ntBASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3tc1G3X9F6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Gm9172-201ENSMUST00000212092 954 ntBASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sh3tc1G3X9F6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sh3tc1G3X9F6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sh3tc1G3X9F6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sh3tc1G3X9F6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Gm36967-201ENSMUST00000193814 266 ntBASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Sh3tc1G3X9F6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms