Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Mir6977-201ENSMUST00000184960 64 ntBASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Gm17968-201ENSMUST00000194902 784 ntBASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc85cE9Q6B2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc85cE9Q6B2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Gm4899-201ENSMUST00000178708 719 ntBASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.29■□□□□ 0.84
Ccdc85cE9Q6B2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc85cE9Q6B2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc85cE9Q6B2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Gm13332-201ENSMUST00000120451 1398 ntBASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC20.26■□□□□ 0.83
Ccdc85cE9Q6B2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc85cE9Q6B2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms