Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Gm44450-201ENSMUST00000199528 114 ntBASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Gm7461-201ENSMUST00000058918 827 ntBASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh17E9PXF0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh17E9PXF0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh17E9PXF0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh17E9PXF0 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.33■□□□□ 0.05
Pcdh17E9PXF0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh17E9PXF0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Gm24589-201ENSMUST00000116692 94 ntBASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh17E9PXF0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh17E9PXF0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Gm29707-201ENSMUST00000196325 491 ntBASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Gm34391-201ENSMUST00000203706 907 ntBASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh17E9PXF0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Gm18421-201ENSMUST00000204122 625 ntBASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh17E9PXF0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms