Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Gm10253-201ENSMUST00000194270 940 ntBASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col6a3E9PWQ3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Col6a3E9PWQ3 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.46■□□□□ 0.22
Col6a3E9PWQ3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Col6a3E9PWQ3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.46■□□□□ 0.22
Col6a3E9PWQ3 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.46■□□□□ 0.22
Col6a3E9PWQ3 Gm5177-201ENSMUST00000183092 997 ntBASIC16.46■□□□□ 0.22
Col6a3E9PWQ3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Col6a3E9PWQ3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col6a3E9PWQ3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Gm15487-201ENSMUST00000122373 465 ntBASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Gm27430-201ENSMUST00000184585 107 ntBASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Gm44333-201ENSMUST00000197168 107 ntBASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col6a3E9PWQ3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col6a3E9PWQ3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.43■□□□□ 0.22
Col6a3E9PWQ3 Gm9257-201ENSMUST00000221254 232 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms