Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm28043E0CXC2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm28043E0CXC2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm28043E0CXC2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm28043E0CXC2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Timm23-208ENSMUST00000226683 750 ntBASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Gm28043E0CXC2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Odf3b-204ENSMUST00000227834 930 ntBASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Gm28043E0CXC2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Mir5122-201ENSMUST00000175004 89 ntBASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Gm21814-202ENSMUST00000203277 873 ntBASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm28043E0CXC2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.55■□□□□ 0.24
Gm28043E0CXC2 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Gm28043E0CXC2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm28043E0CXC2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms