Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Gm9959-201ENSMUST00000068277 390 ntBASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx6-2D3Z4R4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Gm11421-201ENSMUST00000122124 294 ntBASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx6-2D3Z4R4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nkx6-2D3Z4R4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-2D3Z4R4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-2D3Z4R4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-2D3Z4R4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-2D3Z4R4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-2D3Z4R4 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.46□□□□□ -0.26
Nkx6-2D3Z4R4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx6-2D3Z4R4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Nkx6-2D3Z4R4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx6-2D3Z4R4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms