Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sh2d4bA6X942 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sh2d4bA6X942 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sh2d4bA6X942 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Gm15794-201ENSMUST00000120182 631 ntBASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Gm12895-201ENSMUST00000122214 226 ntBASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sh2d4bA6X942 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.64■□□□□ 0.41
Sh2d4bA6X942 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Gm37935-201ENSMUST00000192012 982 ntBASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Sh2d4bA6X942 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sh2d4bA6X942 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Gm10052-201ENSMUST00000168019 960 ntBASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Gm7729-201ENSMUST00000050143 801 ntBASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sh2d4bA6X942 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms