Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.42□□□□□ -0.42
Col6a5A6H584 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.42□□□□□ -0.42
Col6a5A6H584 Rprl2-201ENSMUST00000157150 290 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm27430-201ENSMUST00000184585 107 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm44333-201ENSMUST00000197168 107 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm18062-201ENSMUST00000208020 547 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm6007-201ENSMUST00000208170 823 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 Gm18055-201ENSMUST00000208254 547 ntBASIC12.42□□□□□ -0.42
Col6a5A6H584 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.42□□□□□ -0.42
Col6a5A6H584 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a5A6H584 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.41□□□□□ -0.42
Col6a5A6H584 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.41□□□□□ -0.42
Col6a5A6H584 Mir8112-201ENSMUST00000184382 131 ntBASIC12.41□□□□□ -0.42
Col6a5A6H584 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a5A6H584 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a5A6H584 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col6a5A6H584 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col6a5A6H584 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a5A6H584 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Col6a5A6H584 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.41□□□□□ -0.42
Col6a5A6H584 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.41□□□□□ -0.42
Col6a5A6H584 Gm18889-201ENSMUST00000174284 929 ntBASIC12.41□□□□□ -0.42
Col6a5A6H584 Gm5177-201ENSMUST00000183092 997 ntBASIC12.41□□□□□ -0.42
Col6a5A6H584 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.41□□□□□ -0.42
Col6a5A6H584 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.41□□□□□ -0.42
Col6a5A6H584 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a5A6H584 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC12.4□□□□□ -0.42
Col6a5A6H584 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col6a5A6H584 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.4□□□□□ -0.42
Col6a5A6H584 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a5A6H584 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col6a5A6H584 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.4□□□□□ -0.42
Col6a5A6H584 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.4□□□□□ -0.42
Col6a5A6H584 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.4□□□□□ -0.42
Col6a5A6H584 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.4□□□□□ -0.42
Col6a5A6H584 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a5A6H584 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a5A6H584 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.43
Col6a5A6H584 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.4□□□□□ -0.43
Col6a5A6H584 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms