Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.87□□□□□ -0.19
Col6a4A2AX52 Gm25745-201ENSMUST00000174945 133 ntBASIC13.87□□□□□ -0.19
Col6a4A2AX52 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.87□□□□□ -0.19
Col6a4A2AX52 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Gm6550-201ENSMUST00000187574 993 ntBASIC13.87□□□□□ -0.19
Col6a4A2AX52 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col6a4A2AX52 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.86□□□□□ -0.19
Col6a4A2AX52 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.86□□□□□ -0.19
Col6a4A2AX52 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col6a4A2AX52 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Gm15173-201ENSMUST00000122049 433 ntBASIC13.85□□□□□ -0.19
Col6a4A2AX52 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.85□□□□□ -0.19
Col6a4A2AX52 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col6a4A2AX52 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms