Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Gm8520-201ENSMUST00000186517 868 ntBASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc112A0AUP1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Gm21814-202ENSMUST00000203277 873 ntBASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc112A0AUP1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Actl10-202ENSMUST00000226583 1501 ntBASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Gm13186-201ENSMUST00000118031 316 ntBASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc112A0AUP1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc112A0AUP1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc112A0AUP1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc112A0AUP1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc112A0AUP1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc112A0AUP1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.83■□□□□ 0.61
Ccdc112A0AUP1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc112A0AUP1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc112A0AUP1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms