Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm13181-201ENSMUST00000120117 1069 ntBASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv3-9A0A140T8P4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv3-9A0A140T8P4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Haglr-201ENSMUST00000100000 2085 ntBASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm27011-201ENSMUST00000182352 972 ntBASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm3375-201ENSMUST00000203929 796 ntBASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.47□□□□□ -0.57
Igkv3-9A0A140T8P4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms