Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Gm13474-201ENSMUST00000122466 815 ntBASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav23A0A0G2JG17 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Gm18101-201ENSMUST00000215769 548 ntBASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav23A0A0G2JG17 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav23A0A0G2JG17 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav23A0A0G2JG17 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms