Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Zfp783-201ENSMUST00000095946 670 ntBASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm5874-201ENSMUST00000096101 508 ntBASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Prob1-201ENSMUST00000097619 3021 ntBASIC12.54□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Asic1-205ENSMUST00000228185 1818 ntBASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm6211-202ENSMUST00000167849 925 ntBASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.52□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav3n-3A0A0G2JEM0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms