Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv20A0A0B4J1H5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv20A0A0B4J1H5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv20A0A0B4J1H5 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv20A0A0B4J1H5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv20A0A0B4J1H5 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm4974-201ENSMUST00000209974 875 ntBASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Rab3c-203ENSMUST00000224180 967 ntBASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv20A0A0B4J1H5 Asic1-205ENSMUST00000228185 1818 ntBASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 AV356131-201ENSMUST00000206201 750 ntBASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv20A0A0B4J1H5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv20A0A0B4J1H5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv20A0A0B4J1H5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms