Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm12085-201ENSMUST00000119263 940 ntBASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trbv16A0A0B4J1H3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trbv16A0A0B4J1H3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trbv16A0A0B4J1H3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm10698-201ENSMUST00000182663 604 ntBASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trbv16A0A0B4J1H3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms