Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm44549-201ENSMUST00000208351 577 ntBASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv13-3A0A0B4J1H2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms