Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv15A0A0A6YYE3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Gm26571-201ENSMUST00000181399 666 ntBASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv15A0A0A6YYE3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv15A0A0A6YYE3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv15A0A0A6YYE3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv15A0A0A6YYE3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trbv15A0A0A6YYE3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv15A0A0A6YYE3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv15A0A0A6YYE3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv15A0A0A6YYE3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv15A0A0A6YYE3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Gm9731-201ENSMUST00000209480 747 ntBASIC13.7□□□□□ -0.22
Trbv15A0A0A6YYE3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms