Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-5A0A075B6B5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Gm5408-201ENSMUST00000197998 747 ntBASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Gm10138-203ENSMUST00000206952 366 ntBASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-5A0A075B6B5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Gm7291-201ENSMUST00000199147 382 ntBASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6-5A0A075B6B5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.8□□□□□ -0.36
Trav6-5A0A075B6B5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms